Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP1S1P61966 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
AP1S1P61966 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.13■□□□□ 0.49
AP1S1P61966 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S1P61966 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.13■□□□□ 0.49
AP1S1P61966 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.13■□□□□ 0.49
AP1S1P61966 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
AP1S1P61966 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
AP1S1P61966 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.12■□□□□ 0.49
AP1S1P61966 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.12■□□□□ 0.49
AP1S1P61966 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 AP000997.3-201ENST00000623333 2250 ntBASIC18.12■□□□□ 0.49
AP1S1P61966 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S1P61966 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S1P61966 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S1P61966 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
AP1S1P61966 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S1P61966 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 AC012615.1-201ENST00000565797 1299 ntBASIC18.11■□□□□ 0.49
AP1S1P61966 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
AP1S1P61966 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.11■□□□□ 0.49
AP1S1P61966 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
AP1S1P61966 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S1P61966 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S1P61966 AL390961.4-201ENST00000623958 2535 ntBASIC18.11■□□□□ 0.49
AP1S1P61966 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.1■□□□□ 0.49
AP1S1P61966 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
AP1S1P61966 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.1■□□□□ 0.49
AP1S1P61966 KRT18P55-202ENST00000578578 1546 ntBASIC18.1■□□□□ 0.49
AP1S1P61966 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
AP1S1P61966 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms