Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SMIM11AP58511 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM11AP58511 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.64■□□□□ 0.25
SMIM11AP58511 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMIM11AP58511 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMIM11AP58511 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 AC139713.2-201ENST00000641328 2723 ntBASIC16.63■□□□□ 0.25
SMIM11AP58511 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 AC099343.3-201ENST00000605834 2503 ntBASIC16.63■□□□□ 0.25
SMIM11AP58511 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 AL024508.2-201ENST00000607749 1894 ntBASIC16.63■□□□□ 0.25
SMIM11AP58511 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 AL355355.2-201ENST00000442321 338 ntBASIC16.63■□□□□ 0.25
SMIM11AP58511 AL353719.1-201ENST00000566847 864 ntBASIC16.63■□□□□ 0.25
SMIM11AP58511 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SMIM11AP58511 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
SMIM11AP58511 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM11AP58511 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.63■□□□□ 0.25
SMIM11AP58511 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SMIM11AP58511 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.62■□□□□ 0.25
SMIM11AP58511 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.62■□□□□ 0.25
SMIM11AP58511 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.62■□□□□ 0.25
SMIM11AP58511 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.62■□□□□ 0.25
SMIM11AP58511 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMIM11AP58511 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 AL023803.3-201ENST00000615559 522 ntBASIC16.62■□□□□ 0.25
SMIM11AP58511 CR769767.2-201ENST00000622735 460 ntBASIC16.62■□□□□ 0.25
SMIM11AP58511 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.62■□□□□ 0.25
SMIM11AP58511 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMIM11AP58511 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.62■□□□□ 0.25
SMIM11AP58511 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM11AP58511 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMIM11AP58511 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMIM11AP58511 AL138688.1-201ENST00000624851 1594 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.61■□□□□ 0.25
SMIM11AP58511 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 ABHD17AP1-201ENST00000358206 933 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMIM11AP58511 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.61■□□□□ 0.25
SMIM11AP58511 CCR12P-201ENST00000446203 998 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 FAM201B-201ENST00000458407 597 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 AP003041.3-201ENST00000527151 707 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms