Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 LINC00167-201ENST00000530583 1419 ntBASIC17.26■□□□□ 0.35
VSX2P58304 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
VSX2P58304 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSX2P58304 AC090340.1-201ENST00000620778 4980 ntBASIC17.26■□□□□ 0.35
VSX2P58304 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VSX2P58304 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VSX2P58304 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.25■□□□□ 0.35
VSX2P58304 DRAXINP1-201ENST00000437611 948 ntBASIC17.25■□□□□ 0.35
VSX2P58304 RN7SL606P-201ENST00000472779 293 ntBASIC17.25■□□□□ 0.35
VSX2P58304 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.25■□□□□ 0.35
VSX2P58304 AP000867.3-201ENST00000524675 377 ntBASIC17.25■□□□□ 0.35
VSX2P58304 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.25■□□□□ 0.35
VSX2P58304 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.25■□□□□ 0.35
VSX2P58304 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
VSX2P58304 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.25■□□□□ 0.35
VSX2P58304 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.25■□□□□ 0.35
VSX2P58304 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VSX2P58304 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VSX2P58304 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX2P58304 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VSX2P58304 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.24■□□□□ 0.35
VSX2P58304 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.24■□□□□ 0.35
VSX2P58304 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX2P58304 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.24■□□□□ 0.35
VSX2P58304 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.24■□□□□ 0.35
VSX2P58304 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.24■□□□□ 0.35
VSX2P58304 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VSX2P58304 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.24■□□□□ 0.35
VSX2P58304 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VSX2P58304 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.24■□□□□ 0.35
VSX2P58304 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VSX2P58304 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.23■□□□□ 0.35
VSX2P58304 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 AC093677.2-201ENST00000600169 1863 ntBASIC17.23■□□□□ 0.35
VSX2P58304 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.23■□□□□ 0.35
VSX2P58304 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 AC011840.4-201ENST00000578471 627 ntBASIC17.23■□□□□ 0.35
VSX2P58304 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.23■□□□□ 0.35
VSX2P58304 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 AC009154.2-201ENST00000621177 724 ntBASIC17.23■□□□□ 0.35
VSX2P58304 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VSX2P58304 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VSX2P58304 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VSX2P58304 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.23■□□□□ 0.35
VSX2P58304 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VSX2P58304 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms