Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC011840.4-201ENST00000578471 627 ntBASIC19.85■□□□□ 0.77
PEX3P56589 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.85■□□□□ 0.77
PEX3P56589 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.85■□□□□ 0.77
PEX3P56589 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.85■□□□□ 0.77
PEX3P56589 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.85■□□□□ 0.77
PEX3P56589 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.85■□□□□ 0.77
PEX3P56589 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.85■□□□□ 0.77
PEX3P56589 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
PEX3P56589 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PEX3P56589 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PEX3P56589 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PEX3P56589 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.84■□□□□ 0.77
PEX3P56589 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PEX3P56589 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX3P56589 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX3P56589 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 AC233702.3-201ENST00000578656 1387 ntBASIC19.83■□□□□ 0.77
PEX3P56589 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.83■□□□□ 0.77
PEX3P56589 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.83■□□□□ 0.77
PEX3P56589 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PEX3P56589 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.83■□□□□ 0.77
PEX3P56589 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.83■□□□□ 0.77
PEX3P56589 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PEX3P56589 AC112698.1-201ENST00000510299 916 ntBASIC19.83■□□□□ 0.77
PEX3P56589 AP000867.3-201ENST00000524675 377 ntBASIC19.83■□□□□ 0.77
PEX3P56589 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.83■□□□□ 0.77
PEX3P56589 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.83■□□□□ 0.77
PEX3P56589 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX3P56589 AL390961.4-201ENST00000623958 2535 ntBASIC19.83■□□□□ 0.76
PEX3P56589 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 AC138028.4-201ENST00000564984 1845 ntBASIC19.83■□□□□ 0.76
PEX3P56589 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.83■□□□□ 0.76
PEX3P56589 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.83■□□□□ 0.76
PEX3P56589 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX3P56589 AC138932.1-201ENST00000534164 6830 ntBASIC19.83■□□□□ 0.76
PEX3P56589 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.83■□□□□ 0.76
PEX3P56589 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.83■□□□□ 0.76
PEX3P56589 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.82■□□□□ 0.76
PEX3P56589 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 AP005901.3-202ENST00000581653 237 ntBASIC19.82■□□□□ 0.76
PEX3P56589 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms