Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PMS1P54277 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.83■□□□□ 0.77
PMS1P54277 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PMS1P54277 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
PMS1P54277 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.83■□□□□ 0.77
PMS1P54277 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.83■□□□□ 0.77
PMS1P54277 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PMS1P54277 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PMS1P54277 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.83■□□□□ 0.77
PMS1P54277 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.83■□□□□ 0.76
PMS1P54277 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PMS1P54277 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PMS1P54277 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PMS1P54277 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 AC117947.1-201ENST00000427448 529 ntBASIC19.82■□□□□ 0.76
PMS1P54277 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.82■□□□□ 0.76
PMS1P54277 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 AC140113.3-201ENST00000605663 199 ntBASIC19.82■□□□□ 0.76
PMS1P54277 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PMS1P54277 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS1P54277 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS1P54277 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.82■□□□□ 0.76
PMS1P54277 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PMS1P54277 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PMS1P54277 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 AC005521.1-201ENST00000393351 872 ntBASIC19.81■□□□□ 0.76
PMS1P54277 LIN28AP1-201ENST00000429574 405 ntBASIC19.81■□□□□ 0.76
PMS1P54277 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 AC092597.1-201ENST00000487352 616 ntBASIC19.81■□□□□ 0.76
PMS1P54277 YBX1P2-201ENST00000489612 999 ntBASIC19.81■□□□□ 0.76
PMS1P54277 AC034232.1-201ENST00000506026 1064 ntBASIC19.81■□□□□ 0.76
PMS1P54277 AC113404.2-201ENST00000507884 177 ntBASIC19.81■□□□□ 0.76
PMS1P54277 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.81■□□□□ 0.76
PMS1P54277 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.81■□□□□ 0.76
PMS1P54277 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PMS1P54277 AL136038.4-201ENST00000603606 1261 ntBASIC19.81■□□□□ 0.76
PMS1P54277 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PMS1P54277 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PMS1P54277 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PMS1P54277 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS1P54277 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS1P54277 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PMS1P54277 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms