Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SMSP52788 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SMSP52788 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 ATP5G2P1-201ENST00000433580 426 ntBASIC16.92■□□□□ 0.3
SMSP52788 SLC25A6P5-201ENST00000435663 894 ntBASIC16.92■□□□□ 0.3
SMSP52788 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.92■□□□□ 0.3
SMSP52788 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 GCSHP2-201ENST00000560971 527 ntBASIC16.92■□□□□ 0.3
SMSP52788 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.92■□□□□ 0.3
SMSP52788 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.92■□□□□ 0.3
SMSP52788 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.92■□□□□ 0.3
SMSP52788 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 KRT8P3-201ENST00000519669 1449 ntBASIC16.92■□□□□ 0.3
SMSP52788 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.92■□□□□ 0.3
SMSP52788 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMSP52788 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMSP52788 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
SMSP52788 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMSP52788 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 AC034232.1-201ENST00000506026 1064 ntBASIC16.91■□□□□ 0.3
SMSP52788 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 AC083849.1-201ENST00000615227 514 ntBASIC16.91■□□□□ 0.3
SMSP52788 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.91■□□□□ 0.3
SMSP52788 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMSP52788 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMSP52788 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
SMSP52788 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.91■□□□□ 0.3
SMSP52788 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.91■□□□□ 0.3
SMSP52788 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMSP52788 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMSP52788 AC093677.2-201ENST00000600169 1863 ntBASIC16.9■□□□□ 0.3
SMSP52788 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 KRT8P11-201ENST00000409686 1436 ntBASIC16.9■□□□□ 0.3
SMSP52788 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.9■□□□□ 0.3
SMSP52788 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.9■□□□□ 0.3
SMSP52788 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SMSP52788 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMSP52788 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SMSP52788 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.9■□□□□ 0.3
SMSP52788 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SMSP52788 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMSP52788 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMSP52788 AC138028.4-201ENST00000564984 1845 ntBASIC16.89■□□□□ 0.29
SMSP52788 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms