Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC092364.2-202ENST00000597012 1073 ntBASIC17.09■□□□□ 0.33
KNTC1P50748 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
KNTC1P50748 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
KNTC1P50748 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KNTC1P50748 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KNTC1P50748 PMPCAP1-201ENST00000508114 1576 ntBASIC17.08■□□□□ 0.33
KNTC1P50748 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.08■□□□□ 0.33
KNTC1P50748 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KNTC1P50748 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KNTC1P50748 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KNTC1P50748 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.08■□□□□ 0.33
KNTC1P50748 AC112698.1-201ENST00000510299 916 ntBASIC17.08■□□□□ 0.33
KNTC1P50748 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.08■□□□□ 0.33
KNTC1P50748 AC005829.1-201ENST00000570002 483 ntBASIC17.08■□□□□ 0.33
KNTC1P50748 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.08■□□□□ 0.33
KNTC1P50748 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.08■□□□□ 0.33
KNTC1P50748 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.08■□□□□ 0.32
KNTC1P50748 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.08■□□□□ 0.32
KNTC1P50748 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
KNTC1P50748 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.08■□□□□ 0.32
KNTC1P50748 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.08■□□□□ 0.32
KNTC1P50748 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KNTC1P50748 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KNTC1P50748 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.07■□□□□ 0.32
KNTC1P50748 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.07■□□□□ 0.32
KNTC1P50748 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.07■□□□□ 0.32
KNTC1P50748 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.07■□□□□ 0.32
KNTC1P50748 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.07■□□□□ 0.32
KNTC1P50748 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.07■□□□□ 0.32
KNTC1P50748 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KNTC1P50748 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KNTC1P50748 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
KNTC1P50748 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 FAM8A3P-201ENST00000427218 844 ntBASIC17.06■□□□□ 0.32
KNTC1P50748 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.06■□□□□ 0.32
KNTC1P50748 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
KNTC1P50748 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.06■□□□□ 0.32
KNTC1P50748 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.06■□□□□ 0.32
KNTC1P50748 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.06■□□□□ 0.32
KNTC1P50748 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.06■□□□□ 0.32
KNTC1P50748 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KNTC1P50748 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.06■□□□□ 0.32
KNTC1P50748 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KNTC1P50748 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.06■□□□□ 0.32
KNTC1P50748 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.06■□□□□ 0.32
KNTC1P50748 RFPL4AP1-201ENST00000530883 850 ntBASIC17.06■□□□□ 0.32
KNTC1P50748 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KNTC1P50748 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KNTC1P50748 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KNTC1P50748 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms