Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP4P49662 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.67■□□□□ 0.74
CASP4P49662 AL590326.2-201ENST00000625139 305 ntBASIC19.67■□□□□ 0.74
CASP4P49662 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CASP4P49662 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CASP4P49662 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.67■□□□□ 0.74
CASP4P49662 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CASP4P49662 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CASP4P49662 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP4P49662 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CASP4P49662 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.67■□□□□ 0.74
CASP4P49662 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CASP4P49662 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 AC087388.1-201ENST00000571370 1112 ntBASIC19.66■□□□□ 0.74
CASP4P49662 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 AL445228.2-201ENST00000605589 952 ntBASIC19.66■□□□□ 0.74
CASP4P49662 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.66■□□□□ 0.74
CASP4P49662 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CASP4P49662 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP4P49662 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP4P49662 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CASP4P49662 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP4P49662 AC006116.8-202ENST00000587620 1550 ntBASIC19.66■□□□□ 0.74
CASP4P49662 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP4P49662 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CASP4P49662 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.65■□□□□ 0.74
CASP4P49662 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.65■□□□□ 0.74
CASP4P49662 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CASP4P49662 AC005332.3-201ENST00000589904 676 ntBASIC19.65■□□□□ 0.74
CASP4P49662 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP4P49662 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.65■□□□□ 0.74
CASP4P49662 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.65■□□□□ 0.74
CASP4P49662 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CASP4P49662 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CASP4P49662 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.64■□□□□ 0.74
CASP4P49662 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.64■□□□□ 0.74
CASP4P49662 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 AL645929.1-201ENST00000420084 975 ntBASIC19.64■□□□□ 0.73
CASP4P49662 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.64■□□□□ 0.73
CASP4P49662 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.64■□□□□ 0.73
CASP4P49662 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 GPR32P1-201ENST00000601788 811 ntBASIC19.64■□□□□ 0.73
CASP4P49662 AL390719.2-201ENST00000606993 987 ntBASIC19.64■□□□□ 0.73
CASP4P49662 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.64■□□□□ 0.73
CASP4P49662 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.64■□□□□ 0.73
CASP4P49662 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 AL353692.3-201ENST00000407031 1396 ntBASIC19.64■□□□□ 0.73
CASP4P49662 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 Z83836.1-201ENST00000624605 1642 ntBASIC19.64■□□□□ 0.73
CASP4P49662 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms