Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 AC018442.1-201ENST00000421439 2061 ntBASIC12.36□□□□□ -0.43
PCP4P48539 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 TRIM80P-201ENST00000455685 2848 ntBASIC12.36□□□□□ -0.43
PCP4P48539 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 AC093525.10-201ENST00000625130 1569 ntBASIC12.36□□□□□ -0.43
PCP4P48539 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 SLC25A6P5-201ENST00000435663 894 ntBASIC12.36□□□□□ -0.43
PCP4P48539 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PCP4P48539 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PCP4P48539 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.36□□□□□ -0.43
PCP4P48539 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.36□□□□□ -0.43
PCP4P48539 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 AC079328.2-201ENST00000561241 3354 ntBASIC12.35□□□□□ -0.43
PCP4P48539 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.35□□□□□ -0.43
PCP4P48539 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PCP4P48539 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.35□□□□□ -0.43
PCP4P48539 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PCP4P48539 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PCP4P48539 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PCP4P48539 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms