Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HTR3AP46098 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HTR3AP46098 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
HTR3AP46098 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.68■□□□□ 0.26
HTR3AP46098 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR3AP46098 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.67■□□□□ 0.26
HTR3AP46098 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.67■□□□□ 0.26
HTR3AP46098 AC211429.1-201ENST00000415277 523 ntBASIC16.67■□□□□ 0.26
HTR3AP46098 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.67■□□□□ 0.26
HTR3AP46098 AC034232.1-201ENST00000506026 1064 ntBASIC16.67■□□□□ 0.26
HTR3AP46098 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.67■□□□□ 0.26
HTR3AP46098 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 AC008687.5-201ENST00000593746 558 ntBASIC16.67■□□□□ 0.26
HTR3AP46098 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HTR3AP46098 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HTR3AP46098 SDHAP2-201ENST00000455183 2001 ntBASIC16.67■□□□□ 0.26
HTR3AP46098 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HTR3AP46098 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.66■□□□□ 0.26
HTR3AP46098 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.66■□□□□ 0.26
HTR3AP46098 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
HTR3AP46098 BX664615.1-201ENST00000443558 458 ntBASIC16.66■□□□□ 0.26
HTR3AP46098 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 COX11P1-201ENST00000489116 835 ntBASIC16.66■□□□□ 0.26
HTR3AP46098 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.66■□□□□ 0.26
HTR3AP46098 MIR3917-201ENST00000580971 93 ntBASIC16.66■□□□□ 0.26
HTR3AP46098 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.66■□□□□ 0.26
HTR3AP46098 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.66■□□□□ 0.26
HTR3AP46098 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HTR3AP46098 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR3AP46098 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.66■□□□□ 0.26
HTR3AP46098 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HTR3AP46098 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HTR3AP46098 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.65■□□□□ 0.26
HTR3AP46098 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.65■□□□□ 0.26
HTR3AP46098 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.65■□□□□ 0.26
HTR3AP46098 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR3AP46098 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HTR3AP46098 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR3AP46098 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HTR3AP46098 AC080080.1-201ENST00000625121 2420 ntBASIC16.65■□□□□ 0.26
HTR3AP46098 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HTR3AP46098 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR3AP46098 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HTR3AP46098 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms