Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.2□□□□□ -0.46
CXCL5P42830 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.2□□□□□ -0.46
CXCL5P42830 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.2□□□□□ -0.46
CXCL5P42830 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL5P42830 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.19□□□□□ -0.46
CXCL5P42830 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.19□□□□□ -0.46
CXCL5P42830 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CXCL5P42830 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.19□□□□□ -0.46
CXCL5P42830 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL5P42830 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.19□□□□□ -0.46
CXCL5P42830 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL5P42830 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CXCL5P42830 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CXCL5P42830 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CXCL5P42830 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 AC012317.2-201ENST00000623305 2251 ntBASIC12.18□□□□□ -0.46
CXCL5P42830 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.18□□□□□ -0.46
CXCL5P42830 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
CXCL5P42830 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CXCL5P42830 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.18□□□□□ -0.46
CXCL5P42830 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.18□□□□□ -0.46
CXCL5P42830 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CXCL5P42830 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 AC009102.3-201ENST00000623118 1491 ntBASIC12.18□□□□□ -0.46
CXCL5P42830 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL5P42830 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL5P42830 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CXCL5P42830 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CXCL5P42830 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL5P42830 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms