Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLP35914 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 MTCL1P1-201ENST00000446207 792 ntBASIC17.95■□□□□ 0.46
HMGCLP35914 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 AC112698.1-201ENST00000510299 916 ntBASIC17.95■□□□□ 0.46
HMGCLP35914 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGCLP35914 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGCLP35914 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.95■□□□□ 0.46
HMGCLP35914 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGCLP35914 IGHV3-41-201ENST00000613121 348 ntBASIC17.95■□□□□ 0.46
HMGCLP35914 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.95■□□□□ 0.46
HMGCLP35914 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HMGCLP35914 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLP35914 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLP35914 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HMGCLP35914 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCLP35914 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
HMGCLP35914 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 TSSC2-201ENST00000450217 709 ntBASIC17.94■□□□□ 0.46
HMGCLP35914 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 AL353801.3-201ENST00000609898 542 ntBASIC17.94■□□□□ 0.46
HMGCLP35914 AL592071.1-201ENST00000611956 408 ntBASIC17.94■□□□□ 0.46
HMGCLP35914 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGCLP35914 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGCLP35914 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGCLP35914 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCLP35914 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCLP35914 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCLP35914 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HMGCLP35914 AC069148.1-201ENST00000608741 768 ntBASIC17.93■□□□□ 0.46
HMGCLP35914 AC124864.1-201ENST00000623408 392 ntBASIC17.93■□□□□ 0.46
HMGCLP35914 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCLP35914 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 AC100803.2-201ENST00000562459 1963 ntBASIC17.93■□□□□ 0.46
HMGCLP35914 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HMGCLP35914 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
HMGCLP35914 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGCLP35914 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCLP35914 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCLP35914 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 AC008764.6-201ENST00000595909 2069 ntBASIC17.92■□□□□ 0.46
HMGCLP35914 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HMGCLP35914 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCLP35914 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGCLP35914 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms