Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
KRT9P35527 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT9P35527 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT9P35527 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT9P35527 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT9P35527 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT9P35527 PCDHA12-202ENST00000613593 2588 ntBASIC19.73■□□□□ 0.75
KRT9P35527 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
KRT9P35527 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KRT9P35527 KRT18P23-201ENST00000435622 1283 ntBASIC19.73■□□□□ 0.75
KRT9P35527 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 ECEL1P2-202ENST00000465689 757 ntBASIC19.73■□□□□ 0.75
KRT9P35527 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
KRT9P35527 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT9P35527 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT9P35527 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KRT9P35527 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT9P35527 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KRT9P35527 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT9P35527 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 LINC01568-207ENST00000641790 1380 ntBASIC19.72■□□□□ 0.75
KRT9P35527 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
KRT9P35527 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
KRT9P35527 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT9P35527 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT9P35527 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
KRT9P35527 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KRT9P35527 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT9P35527 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT9P35527 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT9P35527 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT9P35527 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT9P35527 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT9P35527 KRT8P7-201ENST00000533003 1432 ntBASIC19.71■□□□□ 0.75
KRT9P35527 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT9P35527 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT9P35527 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT9P35527 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
KRT9P35527 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
KRT9P35527 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT9P35527 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRT9P35527 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT9P35527 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT9P35527 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT9P35527 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT9P35527 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KRT9P35527 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms