Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.31■□□□□ 0.36
CCKBRP32239 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCKBRP32239 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 INTS4P1-201ENST00000438455 1935 ntBASIC17.31■□□□□ 0.36
CCKBRP32239 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.31■□□□□ 0.36
CCKBRP32239 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
CCKBRP32239 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCKBRP32239 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
CCKBRP32239 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 AC106730.1-201ENST00000566722 1090 ntBASIC17.3■□□□□ 0.36
CCKBRP32239 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.3■□□□□ 0.36
CCKBRP32239 AC139887.3-201ENST00000568585 713 ntBASIC17.3■□□□□ 0.36
CCKBRP32239 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.3■□□□□ 0.36
CCKBRP32239 MTDHP3-201ENST00000594186 672 ntBASIC17.3■□□□□ 0.36
CCKBRP32239 AC011467.2-201ENST00000598425 242 ntBASIC17.3■□□□□ 0.36
CCKBRP32239 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.3■□□□□ 0.36
CCKBRP32239 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.3■□□□□ 0.36
CCKBRP32239 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
CCKBRP32239 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCKBRP32239 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCKBRP32239 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 AC243591.1-201ENST00000452967 1364 ntBASIC17.29■□□□□ 0.36
CCKBRP32239 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.29■□□□□ 0.36
CCKBRP32239 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.29■□□□□ 0.36
CCKBRP32239 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.29■□□□□ 0.36
CCKBRP32239 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.29■□□□□ 0.36
CCKBRP32239 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 AP001269.4-201ENST00000609611 512 ntBASIC17.29■□□□□ 0.36
CCKBRP32239 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 MIR7706-201ENST00000613747 67 ntBASIC17.29■□□□□ 0.36
CCKBRP32239 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.29■□□□□ 0.36
CCKBRP32239 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
CCKBRP32239 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.29■□□□□ 0.36
CCKBRP32239 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCKBRP32239 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCKBRP32239 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
CCKBRP32239 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCKBRP32239 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
CCKBRP32239 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.28■□□□□ 0.36
CCKBRP32239 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.28■□□□□ 0.36
CCKBRP32239 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.28■□□□□ 0.36
CCKBRP32239 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms