Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 SIRPAP1-201ENST00000448467 1770 ntBASIC20.22■□□□□ 0.83
CTGFP29279 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CTGFP29279 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.22■□□□□ 0.83
CTGFP29279 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.22■□□□□ 0.83
CTGFP29279 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CTGFP29279 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTGFP29279 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CTGFP29279 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.22■□□□□ 0.83
CTGFP29279 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.21■□□□□ 0.83
CTGFP29279 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.21■□□□□ 0.83
CTGFP29279 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.21■□□□□ 0.83
CTGFP29279 AL020989.1-201ENST00000422979 469 ntBASIC20.21■□□□□ 0.83
CTGFP29279 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 KRT19P2-202ENST00000557173 1012 ntBASIC20.21■□□□□ 0.83
CTGFP29279 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.21■□□□□ 0.83
CTGFP29279 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.21■□□□□ 0.83
CTGFP29279 OR7E47P-204ENST00000575924 449 ntBASIC20.21■□□□□ 0.83
CTGFP29279 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.21■□□□□ 0.83
CTGFP29279 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.21■□□□□ 0.83
CTGFP29279 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CTGFP29279 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.21■□□□□ 0.83
CTGFP29279 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
CTGFP29279 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTGFP29279 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CTGFP29279 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTGFP29279 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.21■□□□□ 0.83
CTGFP29279 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTGFP29279 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CTGFP29279 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.2■□□□□ 0.82
CTGFP29279 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CTGFP29279 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.2■□□□□ 0.82
CTGFP29279 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 FAM58CP-201ENST00000435741 640 ntBASIC20.2■□□□□ 0.82
CTGFP29279 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.2■□□□□ 0.82
CTGFP29279 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CTGFP29279 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.2■□□□□ 0.82
CTGFP29279 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CTGFP29279 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTGFP29279 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTGFP29279 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.19■□□□□ 0.82
CTGFP29279 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.19■□□□□ 0.82
CTGFP29279 AL353593.2-201ENST00000602529 1483 ntBASIC20.19■□□□□ 0.82
CTGFP29279 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms