Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRD2P25440 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.36■□□□□ 0.69
BRD2P25440 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.36■□□□□ 0.69
BRD2P25440 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.36■□□□□ 0.69
BRD2P25440 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.36■□□□□ 0.69
BRD2P25440 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.36■□□□□ 0.69
BRD2P25440 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
BRD2P25440 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
BRD2P25440 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.36■□□□□ 0.69
BRD2P25440 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRD2P25440 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
BRD2P25440 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 LINC01311-201ENST00000565162 1445 ntBASIC19.35■□□□□ 0.69
BRD2P25440 AL662844.4-201ENST00000606367 2838 ntBASIC19.35■□□□□ 0.69
BRD2P25440 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 AC099398.1-201ENST00000567919 2776 ntBASIC19.35■□□□□ 0.69
BRD2P25440 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
BRD2P25440 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.35■□□□□ 0.69
BRD2P25440 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.35■□□□□ 0.69
BRD2P25440 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.35■□□□□ 0.69
BRD2P25440 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 AC024563.2-201ENST00000603282 481 ntBASIC19.35■□□□□ 0.69
BRD2P25440 AC083849.1-201ENST00000615227 514 ntBASIC19.35■□□□□ 0.69
BRD2P25440 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.35■□□□□ 0.69
BRD2P25440 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRD2P25440 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BRD2P25440 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.35■□□□□ 0.69
BRD2P25440 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRD2P25440 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.35■□□□□ 0.69
BRD2P25440 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 AC093010.1-201ENST00000473625 1624 ntBASIC19.34■□□□□ 0.69
BRD2P25440 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRD2P25440 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.34■□□□□ 0.69
BRD2P25440 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 SPDYE13P-201ENST00000445314 798 ntBASIC19.34■□□□□ 0.69
BRD2P25440 AL671277.2-201ENST00000458060 996 ntBASIC19.34■□□□□ 0.69
BRD2P25440 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.34■□□□□ 0.69
BRD2P25440 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.34■□□□□ 0.69
BRD2P25440 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BRD2P25440 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.34■□□□□ 0.69
BRD2P25440 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRD2P25440 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRD2P25440 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms