Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MMP11P24347 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 AC112777.1-201ENST00000540175 1423 ntBASIC17.13■□□□□ 0.33
MMP11P24347 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MMP11P24347 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP11P24347 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP11P24347 AC067852.2-201ENST00000590513 2313 ntBASIC17.12■□□□□ 0.33
MMP11P24347 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP11P24347 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
MMP11P24347 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.12■□□□□ 0.33
MMP11P24347 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP11P24347 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP11P24347 AC111152.3-201ENST00000569699 673 ntBASIC17.12■□□□□ 0.33
MMP11P24347 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP11P24347 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP11P24347 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 AL353692.3-201ENST00000407031 1396 ntBASIC17.12■□□□□ 0.33
MMP11P24347 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
MMP11P24347 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP11P24347 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
MMP11P24347 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP11P24347 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP11P24347 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP11P24347 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP11P24347 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP11P24347 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP11P24347 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP11P24347 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
MMP11P24347 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP11P24347 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP11P24347 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP11P24347 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 AL592071.1-201ENST00000611956 408 ntBASIC17.1■□□□□ 0.33
MMP11P24347 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.1■□□□□ 0.33
MMP11P24347 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms