Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.96■□□□□ 0.31
CCL4P13236 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL4P13236 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCL4P13236 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.96■□□□□ 0.31
CCL4P13236 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.96■□□□□ 0.31
CCL4P13236 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.96■□□□□ 0.31
CCL4P13236 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 AC010460.3-201ENST00000511359 1579 ntBASIC16.96■□□□□ 0.31
CCL4P13236 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL4P13236 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CCL4P13236 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL4P13236 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL4P13236 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL4P13236 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.96■□□□□ 0.3
CCL4P13236 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL4P13236 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL4P13236 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL4P13236 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CCL4P13236 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.95■□□□□ 0.3
CCL4P13236 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL4P13236 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL4P13236 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCL4P13236 AC004817.3-201ENST00000602957 2129 ntBASIC16.95■□□□□ 0.3
CCL4P13236 FAM197Y3-203ENST00000618346 717 ntBASIC16.95■□□□□ 0.3
CCL4P13236 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL4P13236 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCL4P13236 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCL4P13236 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL4P13236 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL4P13236 AL031598.1-201ENST00000561511 1773 ntBASIC16.94■□□□□ 0.3
CCL4P13236 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.94■□□□□ 0.3
CCL4P13236 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.94■□□□□ 0.3
CCL4P13236 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCL4P13236 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 UNC93B6-202ENST00000528242 690 ntBASIC16.94■□□□□ 0.3
CCL4P13236 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCL4P13236 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL4P13236 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCL4P13236 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCL4P13236 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.94■□□□□ 0.3
CCL4P13236 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL4P13236 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL4P13236 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 PHGDH-209ENST00000641074 1780 ntBASIC16.93■□□□□ 0.3
CCL4P13236 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL4P13236 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL4P13236 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 AC005104.2-201ENST00000427818 678 ntBASIC16.93■□□□□ 0.3
CCL4P13236 KRT18P3-201ENST00000451602 1288 ntBASIC16.93■□□□□ 0.3
CCL4P13236 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL4P13236 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL4P13236 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL4P13236 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL4P13236 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL4P13236 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms