Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC105339.3-201ENST00000560043 636 ntBASIC20.38■□□□□ 0.85
COL11A1P12107 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A1P12107 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.38■□□□□ 0.85
COL11A1P12107 AC055717.3-201ENST00000622967 595 ntBASIC20.38■□□□□ 0.85
COL11A1P12107 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.38■□□□□ 0.85
COL11A1P12107 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.38■□□□□ 0.85
COL11A1P12107 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.38■□□□□ 0.85
COL11A1P12107 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL11A1P12107 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A1P12107 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL11A1P12107 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A1P12107 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 MIR1199-201ENST00000621445 119 ntBASIC20.37■□□□□ 0.85
COL11A1P12107 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.37■□□□□ 0.85
COL11A1P12107 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COL11A1P12107 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL11A1P12107 RPS2P28-201ENST00000314255 741 ntBASIC20.37■□□□□ 0.85
COL11A1P12107 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.37■□□□□ 0.85
COL11A1P12107 AC108751.1-201ENST00000490852 363 ntBASIC20.37■□□□□ 0.85
COL11A1P12107 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.37■□□□□ 0.85
COL11A1P12107 AP000867.4-201ENST00000641616 219 ntBASIC20.37■□□□□ 0.85
COL11A1P12107 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL11A1P12107 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL11A1P12107 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL11A1P12107 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL11A1P12107 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.36■□□□□ 0.85
COL11A1P12107 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A1P12107 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.36■□□□□ 0.85
COL11A1P12107 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.36■□□□□ 0.85
COL11A1P12107 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.36■□□□□ 0.85
COL11A1P12107 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL11A1P12107 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL11A1P12107 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COL11A1P12107 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.35■□□□□ 0.85
COL11A1P12107 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.35■□□□□ 0.85
COL11A1P12107 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
COL11A1P12107 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A1P12107 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.35■□□□□ 0.85
COL11A1P12107 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.35■□□□□ 0.85
COL11A1P12107 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A1P12107 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL11A1P12107 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL11A1P12107 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 MIR940-201ENST00000401276 94 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 AC004832.2-201ENST00000426397 482 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.34■□□□□ 0.85
COL11A1P12107 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
COL11A1P12107 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL11A1P12107 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
COL11A1P12107 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.34■□□□□ 0.85
COL11A1P12107 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.34■□□□□ 0.85
COL11A1P12107 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.34■□□□□ 0.85
COL11A1P12107 RPSAP43-201ENST00000402237 625 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 AC103564.2-201ENST00000432853 1299 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.34■□□□□ 0.85
COL11A1P12107 AC108073.2-201ENST00000464002 357 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 ALG1L5P-201ENST00000482043 771 ntBASIC20.34■□□□□ 0.85
COL11A1P12107 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.34■□□□□ 0.85
COL11A1P12107 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.34■□□□□ 0.85
COL11A1P12107 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COL11A1P12107 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A1P12107 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.33■□□□□ 0.85
COL11A1P12107 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A1P12107 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms