Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.6■□□□□ 0.41
PCNAP12004 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.6■□□□□ 0.41
PCNAP12004 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCNAP12004 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCNAP12004 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCNAP12004 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNAP12004 PHGDH-209ENST00000641074 1780 ntBASIC17.59■□□□□ 0.41
PCNAP12004 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.59■□□□□ 0.41
PCNAP12004 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCNAP12004 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNAP12004 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 AC010203.1-204ENST00000548782 407 ntBASIC17.59■□□□□ 0.41
PCNAP12004 MIR3180-4-201ENST00000582223 153 ntBASIC17.59■□□□□ 0.41
PCNAP12004 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNAP12004 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.59■□□□□ 0.41
PCNAP12004 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNAP12004 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCNAP12004 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
PCNAP12004 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 AL096828.2-201ENST00000567259 1965 ntBASIC17.59■□□□□ 0.41
PCNAP12004 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCNAP12004 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.58■□□□□ 0.41
PCNAP12004 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCNAP12004 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.58■□□□□ 0.4
PCNAP12004 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.58■□□□□ 0.4
PCNAP12004 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.58■□□□□ 0.4
PCNAP12004 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.58■□□□□ 0.4
PCNAP12004 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.58■□□□□ 0.4
PCNAP12004 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.58■□□□□ 0.4
PCNAP12004 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCNAP12004 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCNAP12004 AC005363.2-201ENST00000618631 242 ntBASIC17.58■□□□□ 0.4
PCNAP12004 AL023973.1-201ENST00000624619 620 ntBASIC17.58■□□□□ 0.4
PCNAP12004 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCNAP12004 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCNAP12004 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.57■□□□□ 0.4
PCNAP12004 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.57■□□□□ 0.4
PCNAP12004 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.57■□□□□ 0.4
PCNAP12004 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms