Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.94■□□□□ 0.62
RARAP10276 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.94■□□□□ 0.62
RARAP10276 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
RARAP10276 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RARAP10276 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.94■□□□□ 0.62
RARAP10276 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.94■□□□□ 0.62
RARAP10276 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RARAP10276 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RARAP10276 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.94■□□□□ 0.62
RARAP10276 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RARAP10276 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.94■□□□□ 0.62
RARAP10276 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RARAP10276 PP12613-201ENST00000424958 2230 ntBASIC18.93■□□□□ 0.62
RARAP10276 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 PVRIG2P-201ENST00000435460 978 ntBASIC18.93■□□□□ 0.62
RARAP10276 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.93■□□□□ 0.62
RARAP10276 COX11P1-201ENST00000489116 835 ntBASIC18.93■□□□□ 0.62
RARAP10276 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.93■□□□□ 0.62
RARAP10276 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.93■□□□□ 0.62
RARAP10276 AL441883.1-201ENST00000566170 1045 ntBASIC18.93■□□□□ 0.62
RARAP10276 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RARAP10276 AC140113.3-201ENST00000605663 199 ntBASIC18.93■□□□□ 0.62
RARAP10276 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 KRT18P55-202ENST00000578578 1546 ntBASIC18.93■□□□□ 0.62
RARAP10276 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.93■□□□□ 0.62
RARAP10276 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RARAP10276 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.92■□□□□ 0.62
RARAP10276 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.92■□□□□ 0.62
RARAP10276 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.92■□□□□ 0.62
RARAP10276 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RARAP10276 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.92■□□□□ 0.62
RARAP10276 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.92■□□□□ 0.62
RARAP10276 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.92■□□□□ 0.62
RARAP10276 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.92■□□□□ 0.62
RARAP10276 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RARAP10276 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RARAP10276 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
RARAP10276 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RARAP10276 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RARAP10276 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 AC005521.1-201ENST00000393351 872 ntBASIC18.91■□□□□ 0.62
RARAP10276 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RARAP10276 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.91■□□□□ 0.62
RARAP10276 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.91■□□□□ 0.62
RARAP10276 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.91■□□□□ 0.62
RARAP10276 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.91■□□□□ 0.62
RARAP10276 AC139887.4-201ENST00000607877 719 ntBASIC18.91■□□□□ 0.62
RARAP10276 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.91■□□□□ 0.62
RARAP10276 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.91■□□□□ 0.62
RARAP10276 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
RARAP10276 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.91■□□□□ 0.62
RARAP10276 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RARAP10276 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms