Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CD48P09326 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 RNF152P1-201ENST00000397754 604 ntBASIC18.7■□□□□ 0.58
CD48P09326 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.7■□□□□ 0.58
CD48P09326 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.7■□□□□ 0.58
CD48P09326 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.7■□□□□ 0.58
CD48P09326 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CD48P09326 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 RN7SL850P-201ENST00000579959 291 ntBASIC18.7■□□□□ 0.58
CD48P09326 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.7■□□□□ 0.58
CD48P09326 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CD48P09326 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD48P09326 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.69■□□□□ 0.58
CD48P09326 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CD48P09326 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 AC113404.2-201ENST00000507884 177 ntBASIC18.69■□□□□ 0.58
CD48P09326 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.69■□□□□ 0.58
CD48P09326 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 HYMAI.1-201ENST00000620949 238 ntBASIC18.69■□□□□ 0.58
CD48P09326 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CD48P09326 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CD48P09326 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.69■□□□□ 0.58
CD48P09326 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
CD48P09326 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD48P09326 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD48P09326 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CD48P09326 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD48P09326 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.68■□□□□ 0.58
CD48P09326 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD48P09326 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD48P09326 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CD48P09326 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
CD48P09326 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 HBZP1-201ENST00000354915 429 ntBASIC18.67■□□□□ 0.58
CD48P09326 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.67■□□□□ 0.58
CD48P09326 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.67■□□□□ 0.58
CD48P09326 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 AC112907.2-201ENST00000448639 330 ntBASIC18.67■□□□□ 0.58
CD48P09326 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.67■□□□□ 0.58
CD48P09326 VENTXP5-201ENST00000523979 775 ntBASIC18.67■□□□□ 0.58
CD48P09326 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.67■□□□□ 0.58
CD48P09326 AC008687.5-201ENST00000593746 558 ntBASIC18.67■□□□□ 0.58
CD48P09326 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CD48P09326 AC004263.2-201ENST00000617183 678 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms