Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 AC012317.2-201ENST00000623305 2251 ntBASIC18.15■□□□□ 0.5
MMP2P08253 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.15■□□□□ 0.5
MMP2P08253 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP2P08253 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
MMP2P08253 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MMP2P08253 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP2P08253 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.14■□□□□ 0.5
MMP2P08253 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.14■□□□□ 0.5
MMP2P08253 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP2P08253 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP2P08253 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP2P08253 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP2P08253 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.14■□□□□ 0.49
MMP2P08253 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP2P08253 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MMP2P08253 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP2P08253 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
MMP2P08253 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
MMP2P08253 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MMP2P08253 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MMP2P08253 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP2P08253 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.13■□□□□ 0.49
MMP2P08253 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.13■□□□□ 0.49
MMP2P08253 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 AL592071.1-201ENST00000611956 408 ntBASIC18.13■□□□□ 0.49
MMP2P08253 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP2P08253 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP2P08253 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP2P08253 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP2P08253 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MMP2P08253 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP2P08253 AC134043.2-201ENST00000624206 2238 ntBASIC18.13■□□□□ 0.49
MMP2P08253 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
MMP2P08253 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 BX276092.5-203ENST00000456199 560 ntBASIC18.12■□□□□ 0.49
MMP2P08253 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 AL121672.3-201ENST00000608644 468 ntBASIC18.12■□□□□ 0.49
MMP2P08253 AL353801.3-201ENST00000609898 542 ntBASIC18.12■□□□□ 0.49
MMP2P08253 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms