Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC1P07992 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.03■□□□□ 0.16
ERCC1P07992 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC1P07992 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ERCC1P07992 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ERCC1P07992 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC1P07992 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC1P07992 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC1P07992 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC1P07992 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ERCC1P07992 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.02■□□□□ 0.16
ERCC1P07992 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.02■□□□□ 0.16
ERCC1P07992 AP000593.1-201ENST00000393668 712 ntBASIC16.02■□□□□ 0.16
ERCC1P07992 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 AC011558.1-201ENST00000623459 338 ntBASIC16.02■□□□□ 0.16
ERCC1P07992 AL023973.1-201ENST00000624619 620 ntBASIC16.02■□□□□ 0.16
ERCC1P07992 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ERCC1P07992 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC1P07992 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ERCC1P07992 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC1P07992 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ERCC1P07992 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC1P07992 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ERCC1P07992 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ERCC1P07992 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.02■□□□□ 0.15
ERCC1P07992 OR6D1P-203ENST00000641209 4860 ntBASIC16.02■□□□□ 0.15
ERCC1P07992 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC1P07992 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC1P07992 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.01■□□□□ 0.15
ERCC1P07992 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.01■□□□□ 0.15
ERCC1P07992 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ERCC1P07992 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 AC138028.4-201ENST00000564984 1845 ntBASIC16.01■□□□□ 0.15
ERCC1P07992 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 AC008556.1-201ENST00000610908 2040 ntBASIC16.01■□□□□ 0.15
ERCC1P07992 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.01■□□□□ 0.15
ERCC1P07992 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.01■□□□□ 0.15
ERCC1P07992 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.01■□□□□ 0.15
ERCC1P07992 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.01■□□□□ 0.15
ERCC1P07992 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ERCC1P07992 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.01■□□□□ 0.15
ERCC1P07992 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 AL109659.2-201ENST00000606809 1674 ntBASIC16.01■□□□□ 0.15
ERCC1P07992 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERCC1P07992 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
ERCC1P07992 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
ERCC1P07992 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms