Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.17■□□□□ 0.5
RETP07949 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.17■□□□□ 0.5
RETP07949 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RETP07949 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.17■□□□□ 0.5
RETP07949 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
RETP07949 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.17■□□□□ 0.5
RETP07949 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
RETP07949 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.17■□□□□ 0.5
RETP07949 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
RETP07949 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.17■□□□□ 0.5
RETP07949 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RETP07949 LETM1P2-201ENST00000597330 2178 ntBASIC18.17■□□□□ 0.5
RETP07949 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RETP07949 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
RETP07949 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RETP07949 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.16■□□□□ 0.5
RETP07949 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RETP07949 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 AC104581.1-202ENST00000635932 2618 ntBASIC18.16■□□□□ 0.5
RETP07949 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RETP07949 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 RCN1P2-201ENST00000398357 915 ntBASIC18.16■□□□□ 0.5
RETP07949 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.16■□□□□ 0.5
RETP07949 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.16■□□□□ 0.5
RETP07949 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.16■□□□□ 0.5
RETP07949 AC034105.1-201ENST00000563488 319 ntBASIC18.16■□□□□ 0.5
RETP07949 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RETP07949 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.16■□□□□ 0.5
RETP07949 AC134684.3-201ENST00000641758 218 ntBASIC18.16■□□□□ 0.5
RETP07949 AC135050.7-201ENST00000624508 2218 ntBASIC18.16■□□□□ 0.5
RETP07949 Z98044.1-201ENST00000632503 1764 ntBASIC18.16■□□□□ 0.5
RETP07949 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.16■□□□□ 0.5
RETP07949 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RETP07949 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RETP07949 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.15■□□□□ 0.5
RETP07949 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.15■□□□□ 0.5
RETP07949 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RETP07949 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RETP07949 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RETP07949 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RETP07949 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RETP07949 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.15■□□□□ 0.5
RETP07949 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.15■□□□□ 0.5
RETP07949 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.15■□□□□ 0.5
RETP07949 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.15■□□□□ 0.5
RETP07949 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.15■□□□□ 0.5
RETP07949 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.15■□□□□ 0.5
RETP07949 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
RETP07949 MIR3197-201ENST00000582241 73 ntBASIC18.15■□□□□ 0.5
RETP07949 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.15■□□□□ 0.5
RETP07949 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.15■□□□□ 0.5
RETP07949 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 AC026471.1-201ENST00000564629 3026 ntBASIC18.15■□□□□ 0.5
RETP07949 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RETP07949 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 HLA-J-201ENST00000462773 1622 ntBASIC18.15■□□□□ 0.5
RETP07949 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RETP07949 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RETP07949 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RETP07949 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.14■□□□□ 0.5
RETP07949 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RETP07949 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RETP07949 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RETP07949 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.14■□□□□ 0.49
RETP07949 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms