Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM3P06753 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM3P06753 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TPM3P06753 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 AC018695.7-201ENST00000624587 2492 ntBASIC20.25■□□□□ 0.83
TPM3P06753 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TPM3P06753 KSR1P1-201ENST00000446298 240 ntBASIC20.25■□□□□ 0.83
TPM3P06753 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 AL353708.3-201ENST00000610272 989 ntBASIC20.25■□□□□ 0.83
TPM3P06753 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 AL138688.1-201ENST00000624851 1594 ntBASIC20.25■□□□□ 0.83
TPM3P06753 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
TPM3P06753 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM3P06753 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM3P06753 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.24■□□□□ 0.83
TPM3P06753 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.24■□□□□ 0.83
TPM3P06753 AC026271.3-201ENST00000571884 352 ntBASIC20.24■□□□□ 0.83
TPM3P06753 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TPM3P06753 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM3P06753 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM3P06753 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM3P06753 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TPM3P06753 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TPM3P06753 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM3P06753 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM3P06753 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
TPM3P06753 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM3P06753 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TPM3P06753 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TPM3P06753 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TPM3P06753 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 AC026366.1-201ENST00000488803 879 ntBASIC20.23■□□□□ 0.83
TPM3P06753 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.23■□□□□ 0.83
TPM3P06753 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TPM3P06753 AC011298.2-201ENST00000617989 482 ntBASIC20.23■□□□□ 0.83
TPM3P06753 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM3P06753 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 PHGDH-209ENST00000641074 1780 ntBASIC20.23■□□□□ 0.83
TPM3P06753 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM3P06753 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM3P06753 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TPM3P06753 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.22■□□□□ 0.83
TPM3P06753 MIR564-202ENST00000385049 94 ntBASIC20.22■□□□□ 0.83
TPM3P06753 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms