Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TCRAP04437 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRAP04437 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
TCRAP04437 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRAP04437 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TCRAP04437 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TCRAP04437 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TCRAP04437 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TCRAP04437 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRAP04437 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.75□□□□□ -0.21
TCRAP04437 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.75□□□□□ -0.21
TCRAP04437 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TCRAP04437 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TCRAP04437 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.75□□□□□ -0.21
TCRAP04437 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 CR392000.1-201ENST00000624770 1228 ntBASIC13.75□□□□□ -0.21
TCRAP04437 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.75□□□□□ -0.21
TCRAP04437 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.75□□□□□ -0.21
TCRAP04437 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TCRAP04437 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TCRAP04437 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 AC133963.1-201ENST00000504166 1679 ntBASIC13.75□□□□□ -0.21
TCRAP04437 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 TNRC18P3-201ENST00000441896 2691 ntBASIC13.75□□□□□ -0.21
TCRAP04437 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.75□□□□□ -0.21
TCRAP04437 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TCRAP04437 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TCRAP04437 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.74□□□□□ -0.21
TCRAP04437 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.74□□□□□ -0.21
TCRAP04437 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 MIR3180-5-201ENST00000583743 153 ntBASIC13.74□□□□□ -0.21
TCRAP04437 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.74□□□□□ -0.21
TCRAP04437 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.74□□□□□ -0.21
TCRAP04437 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TCRAP04437 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.74□□□□□ -0.21
TCRAP04437 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TCRAP04437 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms