Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
IFNB1P01574 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
IFNB1P01574 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.7■□□□□ 0.58
IFNB1P01574 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 AL024508.2-201ENST00000607749 1894 ntBASIC18.7■□□□□ 0.58
IFNB1P01574 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.7■□□□□ 0.58
IFNB1P01574 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
IFNB1P01574 OR6D1P-203ENST00000641209 4860 ntBASIC18.7■□□□□ 0.58
IFNB1P01574 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFNB1P01574 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.69■□□□□ 0.58
IFNB1P01574 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
IFNB1P01574 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
IFNB1P01574 INGX-201ENST00000359239 846 ntBASIC18.69■□□□□ 0.58
IFNB1P01574 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.69■□□□□ 0.58
IFNB1P01574 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.69■□□□□ 0.58
IFNB1P01574 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.69■□□□□ 0.58
IFNB1P01574 AC010653.2-201ENST00000623505 997 ntBASIC18.69■□□□□ 0.58
IFNB1P01574 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.69■□□□□ 0.58
IFNB1P01574 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFNB1P01574 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.68■□□□□ 0.58
IFNB1P01574 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFNB1P01574 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 TSPY14P-201ENST00000303979 915 ntBASIC18.68■□□□□ 0.58
IFNB1P01574 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
IFNB1P01574 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 AC010240.3-201ENST00000607688 395 ntBASIC18.68■□□□□ 0.58
IFNB1P01574 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.68■□□□□ 0.58
IFNB1P01574 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.68■□□□□ 0.58
IFNB1P01574 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFNB1P01574 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
IFNB1P01574 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFNB1P01574 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
IFNB1P01574 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
IFNB1P01574 TSPY15P-201ENST00000457163 923 ntBASIC18.67■□□□□ 0.58
IFNB1P01574 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.67■□□□□ 0.58
IFNB1P01574 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.67■□□□□ 0.58
IFNB1P01574 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.67■□□□□ 0.58
IFNB1P01574 MIR3180-4-201ENST00000582223 153 ntBASIC18.67■□□□□ 0.58
IFNB1P01574 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.67■□□□□ 0.58
IFNB1P01574 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFNB1P01574 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
IFNB1P01574 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFNB1P01574 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.67■□□□□ 0.58
IFNB1P01574 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFNB1P01574 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms