Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
IFNA1P01562 TSPY26P-202ENST00000565928 3884 ntBASIC14.3□□□□□ -0.12
IFNA1P01562 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 PCDHB19P-201ENST00000570871 2371 ntBASIC14.3□□□□□ -0.12
IFNA1P01562 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
IFNA1P01562 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 RPS2P52-201ENST00000469610 820 ntBASIC14.29□□□□□ -0.12
IFNA1P01562 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 AL160286.2-201ENST00000567150 934 ntBASIC14.29□□□□□ -0.12
IFNA1P01562 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
IFNA1P01562 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.29□□□□□ -0.12
IFNA1P01562 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFNA1P01562 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.28□□□□□ -0.12
IFNA1P01562 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 SUDS3P1-201ENST00000505831 966 ntBASIC14.28□□□□□ -0.12
IFNA1P01562 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 AC005181.1-201ENST00000604782 1256 ntBASIC14.28□□□□□ -0.12
IFNA1P01562 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 AC131212.1-201ENST00000613771 668 ntBASIC14.28□□□□□ -0.12
IFNA1P01562 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms