Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ALDH1A1P00352 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 AC010507.1-201ENST00000633895 436 ntBASIC20.46■□□□□ 0.87
ALDH1A1P00352 AC007064.4-201ENST00000637740 555 ntBASIC20.46■□□□□ 0.87
ALDH1A1P00352 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.46■□□□□ 0.87
ALDH1A1P00352 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 AC010460.3-201ENST00000511359 1579 ntBASIC20.46■□□□□ 0.87
ALDH1A1P00352 LINC01006-201ENST00000333319 2292 ntBASIC20.46■□□□□ 0.87
ALDH1A1P00352 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALDH1A1P00352 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
ALDH1A1P00352 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALDH1A1P00352 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 RHOQP3-201ENST00000437982 621 ntBASIC20.45■□□□□ 0.86
ALDH1A1P00352 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALDH1A1P00352 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALDH1A1P00352 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALDH1A1P00352 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALDH1A1P00352 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.45■□□□□ 0.86
ALDH1A1P00352 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 FAM86GP-201ENST00000448322 971 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 AC005498.2-205ENST00000593218 784 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AJ011932.1-201ENST00000621707 465 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AC105339.1-204ENST00000636249 355 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AF228730.6-201ENST00000641497 218 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AL805961.1-202ENST00000641562 540 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AC084121.3-201ENST00000641716 218 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 AC105233.6-201ENST00000642093 218 ntBASIC20.44■□□□□ 0.86
ALDH1A1P00352 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALDH1A1P00352 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.44■□□□□ 0.86
ALDH1A1P00352 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 AC004461.1-201ENST00000412461 403 ntBASIC20.43■□□□□ 0.86
ALDH1A1P00352 AC005034.1-201ENST00000426657 489 ntBASIC20.43■□□□□ 0.86
ALDH1A1P00352 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms