Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 IGHV3-47-201ENST00000425060 335 ntBASIC18.98■□□□□ 0.63
RTN3O95197 AC068472.1-201ENST00000474589 881 ntBASIC18.98■□□□□ 0.63
RTN3O95197 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN3O95197 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN3O95197 AL121772.3-201ENST00000610840 674 ntBASIC18.98■□□□□ 0.63
RTN3O95197 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTN3O95197 AL691432.3-201ENST00000621860 400 ntBASIC18.98■□□□□ 0.63
RTN3O95197 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTN3O95197 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN3O95197 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN3O95197 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.97■□□□□ 0.63
RTN3O95197 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.97■□□□□ 0.63
RTN3O95197 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 WIZP1-201ENST00000531444 2299 ntBASIC18.97■□□□□ 0.63
RTN3O95197 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTN3O95197 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RTN3O95197 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN3O95197 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN3O95197 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN3O95197 NSUN5P1-202ENST00000421140 1535 ntBASIC18.96■□□□□ 0.63
RTN3O95197 NSUN5P2-203ENST00000457352 1529 ntBASIC18.96■□□□□ 0.63
RTN3O95197 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN3O95197 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTN3O95197 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN3O95197 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.96■□□□□ 0.63
RTN3O95197 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.96■□□□□ 0.63
RTN3O95197 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN3O95197 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN3O95197 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.96■□□□□ 0.63
RTN3O95197 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN3O95197 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RTN3O95197 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 MTCL1P1-201ENST00000446207 792 ntBASIC18.95■□□□□ 0.62
RTN3O95197 MINOS1P3-201ENST00000457048 203 ntBASIC18.95■□□□□ 0.62
RTN3O95197 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN3O95197 FOSL1P1-201ENST00000511041 816 ntBASIC18.95■□□□□ 0.62
RTN3O95197 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN3O95197 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN3O95197 AC111152.3-201ENST00000569699 673 ntBASIC18.95■□□□□ 0.62
RTN3O95197 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN3O95197 AP005901.3-202ENST00000581653 237 ntBASIC18.95■□□□□ 0.62
RTN3O95197 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN3O95197 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 AC099336.1-202ENST00000602961 463 ntBASIC18.95■□□□□ 0.62
RTN3O95197 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
RTN3O95197 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 AL138781.2-201ENST00000617896 1843 ntBASIC18.95■□□□□ 0.62
RTN3O95197 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN3O95197 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN3O95197 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms