Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 HTR7P1-201ENST00000538670 1336 ntBASIC15.72■□□□□ 0.11
UPK1BO75841 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UPK1BO75841 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UPK1BO75841 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
UPK1BO75841 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.72■□□□□ 0.11
UPK1BO75841 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.72■□□□□ 0.11
UPK1BO75841 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
UPK1BO75841 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.72■□□□□ 0.11
UPK1BO75841 AL589743.5-201ENST00000616611 1050 ntBASIC15.72■□□□□ 0.11
UPK1BO75841 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.72■□□□□ 0.11
UPK1BO75841 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UPK1BO75841 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK1BO75841 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 AC005915.1-201ENST00000624912 2018 ntBASIC15.72■□□□□ 0.11
UPK1BO75841 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK1BO75841 AC024909.3-201ENST00000611513 2257 ntBASIC15.71■□□□□ 0.11
UPK1BO75841 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
UPK1BO75841 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UPK1BO75841 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.71■□□□□ 0.11
UPK1BO75841 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 GUSBP5-201ENST00000418136 578 ntBASIC15.71■□□□□ 0.11
UPK1BO75841 TUBB8P6-201ENST00000436895 1288 ntBASIC15.71■□□□□ 0.11
UPK1BO75841 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 AC092437.1-201ENST00000624794 1048 ntBASIC15.71■□□□□ 0.11
UPK1BO75841 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.71■□□□□ 0.11
UPK1BO75841 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.71■□□□□ 0.11
UPK1BO75841 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK1BO75841 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
UPK1BO75841 AC093010.1-201ENST00000473625 1624 ntBASIC15.71■□□□□ 0.11
UPK1BO75841 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK1BO75841 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1BO75841 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.71■□□□□ 0.1
UPK1BO75841 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
UPK1BO75841 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1BO75841 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.71■□□□□ 0.1
UPK1BO75841 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK1BO75841 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.71■□□□□ 0.1
UPK1BO75841 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
UPK1BO75841 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK1BO75841 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
UPK1BO75841 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.7■□□□□ 0.1
UPK1BO75841 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UPK1BO75841 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 LINC00304-203ENST00000565008 1864 ntBASIC15.7■□□□□ 0.1
UPK1BO75841 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK1BO75841 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms