Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 MIR149-201ENST00000384879 89 ntBASIC7.98□□□□□ -1.13
USH2AO75445 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC7.98□□□□□ -1.13
USH2AO75445 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 AC067863.1-201ENST00000494933 530 ntBASIC7.98□□□□□ -1.13
USH2AO75445 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 IGHV3OR16-16-201ENST00000563644 343 ntBASIC7.98□□□□□ -1.13
USH2AO75445 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC7.98□□□□□ -1.13
USH2AO75445 NAT9-224ENST00000583757 583 ntTSL 3 BASIC7.98□□□□□ -1.13
USH2AO75445 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 Z98044.1-201ENST00000632503 1764 ntBASIC7.98□□□□□ -1.13
USH2AO75445 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 AC025580.3-201ENST00000617932 1424 ntBASIC7.98□□□□□ -1.13
USH2AO75445 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
USH2AO75445 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC7.98□□□□□ -1.13
USH2AO75445 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC7.98□□□□□ -1.13
USH2AO75445 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 TP73-202ENST00000354437 2140 ntTSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
USH2AO75445 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC7.98□□□□□ -1.13
USH2AO75445 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC7.98□□□□□ -1.13
USH2AO75445 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 AC092919.2-201ENST00000623631 1645 ntBASIC7.98□□□□□ -1.13
USH2AO75445 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC7.98□□□□□ -1.13
USH2AO75445 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USH2AO75445 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 NME6-203ENST00000415644 849 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 HNRNPA1P40-201ENST00000426371 1278 ntBASIC7.97□□□□□ -1.13
USH2AO75445 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC7.97□□□□□ -1.13
USH2AO75445 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC7.97□□□□□ -1.13
USH2AO75445 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
USH2AO75445 AL163051.1-201ENST00000569214 1512 ntBASIC7.97□□□□□ -1.13
USH2AO75445 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 GOLGA2P11-201ENST00000562660 1621 ntBASIC7.97□□□□□ -1.13
USH2AO75445 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 DGCR5-201ENST00000399539 862 ntBASIC7.97□□□□□ -1.13
USH2AO75445 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC7.97□□□□□ -1.13
USH2AO75445 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 COX11-202ENST00000571584 1108 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 AC138969.3-201ENST00000546612 1459 ntBASIC7.97□□□□□ -1.13
USH2AO75445 AC138932.2-201ENST00000548268 1459 ntBASIC7.97□□□□□ -1.13
USH2AO75445 AC126755.4-201ENST00000549796 1459 ntBASIC7.97□□□□□ -1.13
USH2AO75445 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 Z82202.1-201ENST00000623446 1880 ntBASIC7.97□□□□□ -1.13
USH2AO75445 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 PIN1P1-201ENST00000412108 996 ntBASIC7.97□□□□□ -1.13
USH2AO75445 RPS15P9-201ENST00000494093 319 ntBASIC7.97□□□□□ -1.13
USH2AO75445 GATB-205ENST00000508611 605 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 AC112698.1-201ENST00000510299 916 ntBASIC7.97□□□□□ -1.13
USH2AO75445 POLE2-203ENST00000553805 496 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 AC023141.13-201ENST00000604991 943 ntBASIC7.97□□□□□ -1.13
USH2AO75445 AC068137.2-201ENST00000605408 478 ntBASIC7.97□□□□□ -1.13
USH2AO75445 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms