Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 KRT18P55-202ENST00000578578 1546 ntBASIC16.01■□□□□ 0.15
ZNF254O75437 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF254O75437 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF254O75437 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ZNF254O75437 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF254O75437 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 AC092338.2-201ENST00000568827 1415 ntBASIC16.01■□□□□ 0.15
ZNF254O75437 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.01■□□□□ 0.15
ZNF254O75437 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF254O75437 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF254O75437 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF254O75437 AC006116.8-202ENST00000587620 1550 ntBASIC16■□□□□ 0.15
ZNF254O75437 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16■□□□□ 0.15
ZNF254O75437 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
ZNF254O75437 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 MIR718-201ENST00000390190 70 ntBASIC16■□□□□ 0.15
ZNF254O75437 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16■□□□□ 0.15
ZNF254O75437 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16■□□□□ 0.15
ZNF254O75437 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
ZNF254O75437 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF254O75437 AC112497.1-201ENST00000624824 639 ntBASIC16■□□□□ 0.15
ZNF254O75437 AC116562.4-202ENST00000641738 218 ntBASIC16■□□□□ 0.15
ZNF254O75437 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ZNF254O75437 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 LINC01126-201ENST00000623515 1646 ntBASIC16■□□□□ 0.15
ZNF254O75437 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
ZNF254O75437 FER1L4-210ENST00000615531 5998 ntBASIC16■□□□□ 0.15
ZNF254O75437 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF254O75437 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF254O75437 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF254O75437 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ZNF254O75437 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF254O75437 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.99■□□□□ 0.15
ZNF254O75437 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF254O75437 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF254O75437 RBM17P1-201ENST00000453646 1190 ntBASIC15.99■□□□□ 0.15
ZNF254O75437 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF254O75437 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF254O75437 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 AL645608.8-201ENST00000606034 2086 ntBASIC15.99■□□□□ 0.15
ZNF254O75437 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF254O75437 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ZNF254O75437 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms