Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 BICD1-207ENST00000551848 1962 ntBASIC17.51■□□□□ 0.39
CNOT3O75175 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT3O75175 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT3O75175 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 HOXB1-202ENST00000577092 1414 ntBASIC17.51■□□□□ 0.39
CNOT3O75175 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT3O75175 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CNOT3O75175 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT3O75175 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CNOT3O75175 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT3O75175 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT3O75175 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT3O75175 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 AL645929.1-201ENST00000420084 975 ntBASIC17.5■□□□□ 0.39
CNOT3O75175 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT3O75175 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT3O75175 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.5■□□□□ 0.39
CNOT3O75175 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CNOT3O75175 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNOT3O75175 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNOT3O75175 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNOT3O75175 AL354751.1-201ENST00000412768 1863 ntBASIC17.5■□□□□ 0.39
CNOT3O75175 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT3O75175 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT3O75175 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT3O75175 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 AC093525.10-201ENST00000625130 1569 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.49■□□□□ 0.39
CNOT3O75175 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CNOT3O75175 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 HLA-F-220ENST00000434407 884 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 KRT18P56-201ENST00000507275 550 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.49■□□□□ 0.39
CNOT3O75175 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT3O75175 AC104390.1-201ENST00000555663 520 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms