Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 IGHGP-201ENST00000390555 1178 ntBASIC17.35■□□□□ 0.37
PRAMEF4O60810 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 KRT18P21-201ENST00000515767 1272 ntBASIC17.35■□□□□ 0.37
PRAMEF4O60810 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.35■□□□□ 0.37
PRAMEF4O60810 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 LINC01311-201ENST00000565162 1445 ntBASIC17.35■□□□□ 0.37
PRAMEF4O60810 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 AC138932.1-201ENST00000534164 6830 ntBASIC17.35■□□□□ 0.37
PRAMEF4O60810 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEF4O60810 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEF4O60810 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF4O60810 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 KRT8P47-201ENST00000604727 1398 ntBASIC17.34■□□□□ 0.37
PRAMEF4O60810 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF4O60810 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF4O60810 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
PRAMEF4O60810 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.33■□□□□ 0.37
PRAMEF4O60810 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF4O60810 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF4O60810 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRAMEF4O60810 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF4O60810 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 AC092647.4-201ENST00000457211 535 ntBASIC17.33■□□□□ 0.36
PRAMEF4O60810 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF4O60810 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEF4O60810 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms