Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IDH3BO43837 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.6■□□□□ 0.25
IDH3BO43837 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IDH3BO43837 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IDH3BO43837 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IDH3BO43837 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IDH3BO43837 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IDH3BO43837 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IDH3BO43837 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IDH3BO43837 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IDH3BO43837 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IDH3BO43837 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
IDH3BO43837 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.59■□□□□ 0.25
IDH3BO43837 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
IDH3BO43837 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IDH3BO43837 AC138028.4-201ENST00000564984 1845 ntBASIC16.59■□□□□ 0.25
IDH3BO43837 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
IDH3BO43837 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.59■□□□□ 0.25
IDH3BO43837 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.59■□□□□ 0.25
IDH3BO43837 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.59■□□□□ 0.25
IDH3BO43837 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.59■□□□□ 0.25
IDH3BO43837 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 AP001412.1-201ENST00000608405 714 ntBASIC16.59■□□□□ 0.25
IDH3BO43837 ITM2C-210ENST00000620962 501 ntBASIC16.59■□□□□ 0.25
IDH3BO43837 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
IDH3BO43837 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.59■□□□□ 0.25
IDH3BO43837 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IDH3BO43837 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IDH3BO43837 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IDH3BO43837 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.58■□□□□ 0.25
IDH3BO43837 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IDH3BO43837 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IDH3BO43837 MFAP1P1-201ENST00000442257 1255 ntBASIC16.58■□□□□ 0.24
IDH3BO43837 NUDT16P1-203ENST00000513809 620 ntBASIC16.58■□□□□ 0.24
IDH3BO43837 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.58■□□□□ 0.24
IDH3BO43837 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.58■□□□□ 0.24
IDH3BO43837 SLC25A1P4-201ENST00000567977 778 ntBASIC16.58■□□□□ 0.24
IDH3BO43837 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.58■□□□□ 0.24
IDH3BO43837 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IDH3BO43837 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
IDH3BO43837 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.57■□□□□ 0.24
IDH3BO43837 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IDH3BO43837 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IDH3BO43837 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IDH3BO43837 AC012317.2-201ENST00000623305 2251 ntBASIC16.57■□□□□ 0.24
IDH3BO43837 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.57■□□□□ 0.24
IDH3BO43837 GPAT2P1-201ENST00000444924 1672 ntBASIC16.57■□□□□ 0.24
IDH3BO43837 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
IDH3BO43837 GMCL1P1-201ENST00000463439 1581 ntBASIC16.57■□□□□ 0.24
IDH3BO43837 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IDH3BO43837 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
IDH3BO43837 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IDH3BO43837 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IDH3BO43837 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IDH3BO43837 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IDH3BO43837 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IDH3BO43837 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IDH3BO43837 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms