Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
ACTN4O43707 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.23■□□□□ 0.83
ACTN4O43707 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.23■□□□□ 0.83
ACTN4O43707 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.23■□□□□ 0.83
ACTN4O43707 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.23■□□□□ 0.83
ACTN4O43707 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 AC012306.2-201ENST00000609350 630 ntBASIC20.23■□□□□ 0.83
ACTN4O43707 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ACTN4O43707 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
ACTN4O43707 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ACTN4O43707 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ACTN4O43707 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.23■□□□□ 0.83
ACTN4O43707 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.23■□□□□ 0.83
ACTN4O43707 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACTN4O43707 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
ACTN4O43707 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.22■□□□□ 0.83
ACTN4O43707 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
ACTN4O43707 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 AC139713.2-201ENST00000641328 2723 ntBASIC20.22■□□□□ 0.83
ACTN4O43707 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ACTN4O43707 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 RASA4DP-201ENST00000460726 1199 ntBASIC20.22■□□□□ 0.83
ACTN4O43707 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 AC113404.2-201ENST00000507884 177 ntBASIC20.22■□□□□ 0.83
ACTN4O43707 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 AL441883.1-201ENST00000566170 1045 ntBASIC20.22■□□□□ 0.83
ACTN4O43707 AC008687.5-201ENST00000593746 558 ntBASIC20.22■□□□□ 0.83
ACTN4O43707 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACTN4O43707 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ACTN4O43707 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ACTN4O43707 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.21■□□□□ 0.83
ACTN4O43707 AL355312.1-201ENST00000407115 2176 ntBASIC20.21■□□□□ 0.83
ACTN4O43707 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.21■□□□□ 0.83
ACTN4O43707 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.21■□□□□ 0.83
ACTN4O43707 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.21■□□□□ 0.83
ACTN4O43707 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.21■□□□□ 0.83
ACTN4O43707 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.21■□□□□ 0.83
ACTN4O43707 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.21■□□□□ 0.83
ACTN4O43707 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ACTN4O43707 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
ACTN4O43707 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTN4O43707 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.2■□□□□ 0.82
ACTN4O43707 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms