Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
DDX39AO00148 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX39AO00148 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX39AO00148 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX39AO00148 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
DDX39AO00148 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX39AO00148 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 KRT18P31-201ENST00000506277 1292 ntBASIC20.26■□□□□ 0.83
DDX39AO00148 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.26■□□□□ 0.83
DDX39AO00148 AC096582.2-201ENST00000510860 516 ntBASIC20.26■□□□□ 0.83
DDX39AO00148 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 AC091304.2-201ENST00000564639 760 ntBASIC20.26■□□□□ 0.83
DDX39AO00148 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX39AO00148 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.26■□□□□ 0.83
DDX39AO00148 AL353801.3-201ENST00000609898 542 ntBASIC20.26■□□□□ 0.83
DDX39AO00148 AL121772.3-201ENST00000610840 674 ntBASIC20.26■□□□□ 0.83
DDX39AO00148 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
DDX39AO00148 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX39AO00148 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DDX39AO00148 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX39AO00148 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.25■□□□□ 0.83
DDX39AO00148 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 BCL2-203ENST00000589955 5011 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.25■□□□□ 0.83
DDX39AO00148 AC111152.3-201ENST00000569699 673 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 RN7SL510P-201ENST00000581311 263 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.25■□□□□ 0.83
DDX39AO00148 BNIP3P18-201ENST00000593976 575 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
DDX39AO00148 AL691432.3-201ENST00000621860 400 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
DDX39AO00148 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 AL020996.1-203ENST00000536896 2307 ntBASIC20.25■□□□□ 0.83
DDX39AO00148 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX39AO00148 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 REXO1L9P-201ENST00000604264 2108 ntBASIC20.24■□□□□ 0.83
DDX39AO00148 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DDX39AO00148 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX39AO00148 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.24■□□□□ 0.83
DDX39AO00148 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
DDX39AO00148 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX39AO00148 AC112698.1-201ENST00000510299 916 ntBASIC20.24■□□□□ 0.83
DDX39AO00148 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX39AO00148 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
DDX39AO00148 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.24■□□□□ 0.83
DDX39AO00148 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DDX39AO00148 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX39AO00148 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DDX39AO00148 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX39AO00148 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms