Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 AL645929.1-201ENST00000420084 975 ntBASIC18.31■□□□□ 0.52
CAPN8A6NHC0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 CLEC4GP1-201ENST00000596555 870 ntBASIC18.31■□□□□ 0.52
CAPN8A6NHC0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CAPN8A6NHC0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 AL162741.1-201ENST00000565563 1558 ntBASIC18.3■□□□□ 0.52
CAPN8A6NHC0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 FAM86EP-206ENST00000510506 987 ntBASIC18.3■□□□□ 0.52
CAPN8A6NHC0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN8A6NHC0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 AC005332.1-201ENST00000577698 1310 ntBASIC18.29■□□□□ 0.52
CAPN8A6NHC0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 AC006538.3-201ENST00000612495 578 ntBASIC18.29■□□□□ 0.52
CAPN8A6NHC0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN8A6NHC0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.28■□□□□ 0.52
CAPN8A6NHC0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN8A6NHC0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms