Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 RN7SL606P-201ENST00000472779 293 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC011840.4-201ENST00000578471 627 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 Z69720.1-201ENST00000601483 472 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC233702.3-201ENST00000578656 1387 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC00167-201ENST00000530583 1419 ntBASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IGHV4-28A0A0C4DH34 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 KRT126P-201ENST00000549467 1181 ntBASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC074051.2-201ENST00000565115 352 ntBASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC012615.1-201ENST00000565797 1299 ntBASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGHV4-28A0A0C4DH34 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 AC009154.2-201ENST00000621177 724 ntBASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGHV4-28A0A0C4DH34 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms