Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 AL031284.1-201ENST00000419297 478 ntBASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 AL590627.1-203ENST00000421194 1026 ntBASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 ABCD1P5-201ENST00000445663 754 ntBASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV19A0A0A6YYK7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 AP005117.1-201ENST00000584346 1413 ntBASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 AC093909.1-201ENST00000504731 1122 ntBASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 RNPS1P1-201ENST00000507437 918 ntBASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 RNA5SP419-201ENST00000515908 135 ntBASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 BX640515.1-201ENST00000617215 977 ntBASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV19A0A0A6YYK7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 AC022898.2-201ENST00000616822 1312 ntBASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 FAM220CP-201ENST00000395253 831 ntBASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 AC148477.8-201ENST00000624298 468 ntBASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 AC138932.1-201ENST00000534164 6830 ntBASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV19A0A0A6YYK7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 AC097374.2-201ENST00000618617 1306 ntBASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV19A0A0A6YYK7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV19A0A0A6YYK7 AC018712.1-201ENST00000455767 687 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms