Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 MIR3180-4-201ENST00000582223 153 ntBASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB3Q9Y5G1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AK4P3-201ENST00000418260 669 ntBASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AC112497.1-201ENST00000624824 639 ntBASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 FLJ13224-201ENST00000313737 1514 ntBASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 AL163051.1-201ENST00000569214 1512 ntBASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
PCDHGB3Q9Y5G1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGB3Q9Y5G1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGB3Q9Y5G1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 MIR149-201ENST00000384879 89 ntBASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 AC063952.2-201ENST00000498792 1227 ntBASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGB3Q9Y5G1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms