Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 LETM1P2-201ENST00000597330 2178 ntBASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 AP002383.4-201ENST00000442518 975 ntBASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 AC091304.2-201ENST00000564639 760 ntBASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 AC099343.3-201ENST00000605834 2503 ntBASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 GMCL1P1-201ENST00000463439 1581 ntBASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB11Q9Y5F2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AP000867.3-201ENST00000524675 377 ntBASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC008687.5-201ENST00000593746 558 ntBASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB11Q9Y5F2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms