Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 PCDHB19P-201ENST00000570871 2371 ntBASIC17.09■□□□□ 0.33
AP4S1Q9Y587 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 AC008894.3-201ENST00000624324 3103 ntBASIC17.09■□□□□ 0.33
AP4S1Q9Y587 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.08■□□□□ 0.33
AP4S1Q9Y587 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 AC099343.3-201ENST00000605834 2503 ntBASIC17.08■□□□□ 0.32
AP4S1Q9Y587 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4S1Q9Y587 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 MIR564-202ENST00000385049 94 ntBASIC17.07■□□□□ 0.32
AP4S1Q9Y587 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP4S1Q9Y587 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms