Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 AC114341.1-201ENST00000618070 349 ntBASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00588Q9Y4M8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 AC009533.2-201ENST00000543664 586 ntBASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MIR5100-201ENST00000579544 119 ntBASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 TP73-AS1-210ENST00000637775 1455 ntBASIC12.34□□□□□ -0.43
LINC00588Q9Y4M8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LINC00588Q9Y4M8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LINC00588Q9Y4M8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 RCN1P2-201ENST00000398357 915 ntBASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AL138831.2-201ENST00000606564 490 ntBASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AL031008.1-201ENST00000619963 541 ntBASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00588Q9Y4M8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms