Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 AC097658.1-201ENST00000475555 843 ntBASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 AC080038.1-201ENST00000611274 1154 ntBASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 AC011270.2-201ENST00000624293 2550 ntBASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RCL1Q9Y2P8 AL355312.1-201ENST00000407115 2176 ntBASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CDCA4P2-201ENST00000441182 718 ntBASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 AC099343.3-201ENST00000605834 2503 ntBASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RCL1Q9Y2P8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms