Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 TSPY7P-201ENST00000431358 1114 ntBASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 CCR12P-201ENST00000446203 998 ntBASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 AC104390.1-201ENST00000555663 520 ntBASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 AC009065.1-201ENST00000564055 1225 ntBASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 PKD1P1-201ENST00000458669 6805 ntBASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2BQ9UQN3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 BX088651.1-201ENST00000540551 451 ntBASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMP2BQ9UQN3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AC141586.5-201ENST00000624546 2050 ntBASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AC108860.2-201ENST00000562760 2183 ntBASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AC007663.1-201ENST00000438948 1240 ntBASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP2BQ9UQN3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms