Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 RPS2P28-201ENST00000314255 741 ntBASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 DDX43P3-201ENST00000441064 443 ntBASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPO2Q9UMS6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SYNPO2Q9UMS6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SYNPO2Q9UMS6 SIGLEC16-201ENST00000599858 1437 ntBASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 AC135776.1-201ENST00000319817 2481 ntBASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPO2Q9UMS6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC079776.2-201ENST00000641154 1609 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 PRYP5-201ENST00000451909 266 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC093909.1-201ENST00000504731 1122 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 SART3-203ENST00000546611 1184 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC021087.4-201ENST00000563761 564 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC148477.8-201ENST00000624298 468 ntBASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPO2Q9UMS6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPO2Q9UMS6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms