Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 KRT8P45-201ENST00000414328 1447 ntBASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AC073508.3-201ENST00000619697 1419 ntBASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT11Q9UKZ1 AC006116.8-202ENST00000587620 1550 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 AP003041.3-201ENST00000527151 707 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 RN7SL850P-201ENST00000579959 291 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 AC068587.9-201ENST00000641814 219 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 AC092865.7-201ENST00000641832 219 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT11Q9UKZ1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 KRT18P57-201ENST00000443599 1254 ntBASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT11Q9UKZ1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT11Q9UKZ1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms